Alternate header for print version


Reconstruction
Display image description
An image from the slice by slice reconstruction of a double tilt series for the Caulobacter Crescentus specimen
Full resolution image description
Includes only the final double tilt reconstruction in byte mode. This reconstruction has been saved as a .mrc file format.
Volume_dimension
2242, 3340, 261
Volume scale
0.001, 0.001, 0.001
Animation description
a .mpg movie of the slice by slice reconstruction made from a double tilt series of a Caulobacter Crescentus specimen

Image 2D
Display image description
Image from the 0 degree tilt angle of image set "A" from the double tilt data series.
Full resolution image description
Files that are needed / used for a TxBR reconstruction. Included with the files are the .preali file, the .rawtlt file, .fid file and all processing files.
Animation description
Tilt series of both the "A" and "B" stacks. The animation first shows the tilt series of A and then switches to the tilt series of stack B.

License
Attribution Only: This image is licensed under a Creative Commons Attribution License. View License Deed | View Legal Code

CCDB:3628*  Cite 
Project: P1220
Project name
Caulobacter
Description
Tomography of Caulobacter crescentus
Funding agency
Department of Energy
Leader(s)
Lucy Shapiro
Harley McAdams
Collaborator(s)
Patrick H. Viollier
Tom Deerinck
Mason Mackey
John Crum
Mark Ellisman
Start date
07-01-2003
End date
unspecified
 
Experiment
Experiment ID
3374
Experiment date
05-12-2004
Title
Tomographic reconstruction of caulobacter
Purpose
Produce a series of tomographic data of the normal morphology of Caulobacter Crescentus using rapid freezing methods.
Experimenter(s)
Patrick Viollier
Tom Deerinck
Microscopy product
Microscopy product ID
3628
Instrument
JEOL 4000
Microscopy type
IVEM
Product type
DOUBLE TILT
Image basename
caulo_double1
Spatial Axis Image Size Pixel Size
X 2242px 1 nm/pixels
Y 3340px 1 nm/pixels
Subject
Species
Caulobacter
Scientific name
Caulobacter crescentus
Strain
3724
Treatment
None
Age class
not applicable
Specimen description
Cell type
Caulobacter crescentus
Imaging parameters
Type
Electron microscopy product
Recording medium
film
Magification
30000
Accelerating voltage
400 kV
Specimen preparation
Protocol used
High Pressure Freezing (HPF): completed on January 26th, 2006 using Balzers HPM 010 in 100 micron deep gold plated copper planchettes. Bacteria was centrifuged decanted and paced applied to planchettes.Free Substitution: Started Friday January 26th.1. Cocktail - 2% Osmium tetroxide, 0.5% urynal acetate in anhydrous acetone2. Time -T1: -90 Celsius for 72 hoursS1: 2 Celsius per hour for 15 hoursT2: -60 Celsius per hour for 12 hoursS2: 5 Celsius per hour for 12 hoursT3: 0 Celsius HoldLeica FSU
Imaging product type
Type
Double tilt
X min range
-66 degrees
X max range
66 degrees
X tilt increment
2 degrees
Y min range
-66 degrees
Y max range
64 degrees
Y tilt increment
2 degrees
Description
Caulobacter Crescentus, 0.5 um thick, 400kv